SEset (R package)
A tool to compute and explore statistically-equivalent path models based on GGMs. CRAN: https://cran.r-project.org/web/packages/SEset/
Code
ctnet (R package)
Tools for Continuous-Time Dynamical Network Analysis. Github page: https://github.com/ryanoisin/ctnet
expct (R package)
Estimate auto- and cross-correlations from irregularly spaced time series. Github: https://github.com/ryanoisin/expct
Reproducibility Archives
I strive to make the code I use for analyses in all of my papers open and available through reproducibility archives, found through my publications page